Clinical_connectome_stroke/UKLFR/stroke_UKLFR/anat/sub-STUKLFR0077/tmp_lh.volume.mris_preproc.log.bak

ven 23 ott 2026, 19.34.03, CEST
setenv SUBJECTS_DIR /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer
cd /g100/home/userexternal/anazzi00/ANATpipe
/g100_work/EIRI_E_UNIPD/freesurfer/bin/mris_preproc --s sub-STUKLFR0077 --target fsaverage --hemi lh --meas volume --out /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/sub-STUKLFR0077/features/tmp_lh.volume.mgh

Linux r515n015 4.18.0-240.el8.x86_64 #1 SMP Fri Sep 25 19:48:47 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux
$Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $
freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a
tmpdir is /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/sub-STUKLFR0077/features/tmp.mris_preproc.42771
Src lh sphere.reg
Trg lh sphere.reg




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#@# 1/1 sub-STUKLFR0077 ven 23 ott 2026, 19.34.03, CEST --------------
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mri_surf2surf --srcsubject sub-STUKLFR0077 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/sub-STUKLFR0077/features/tmp.mris_preproc.42771/sub-STUKLFR0077.1.mgh --sval /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer/sub-STUKLFR0077/surf/lh.volume --jac --sfmt curv --noreshape --cortex
Source registration surface changed to sphere.reg
Target registration surface changed to sphere.reg

$Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $

setenv SUBJECTS_DIR /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer
cd /g100/home/userexternal/anazzi00/ANATpipe
mri_surf2surf --srcsubject sub-STUKLFR0077 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/sub-STUKLFR0077/features/tmp.mris_preproc.42771/sub-STUKLFR0077.1.mgh --sval /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer/sub-STUKLFR0077/surf/lh.volume --jac --sfmt curv --noreshape --cortex 

sysname  Linux
hostname r515n015
machine  x86_64
user     anazzi00
srcsubject = sub-STUKLFR0077
srcval     = /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer/sub-STUKLFR0077/surf/lh.volume
srctype    = curv
trgsubject = fsaverage
trgval     = /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/sub-STUKLFR0077/features/tmp.mris_preproc.42771/sub-STUKLFR0077.1.mgh
trgtype    = 
srcsurfreg = sphere.reg
trgsurfreg = sphere.reg
srchemi    = lh
trghemi    = lh
frame      = 0
fwhm-in    = 0
fwhm-out   = 0
label-src  = lh.cortex.label
label-trg  = lh.cortex.label
OKToRevFaceOrder  = 1
UseDualHemi = 0
Reading source surface reg /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer/sub-STUKLFR0077/surf/lh.sphere.reg
Loading source data
Reading curvature file /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer/sub-STUKLFR0077/surf/lh.volume
Reading source subject label mask lh.cortex.label
masking the input
Reading target surface reg /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/vbg/STUKLFR0077/output_VBG/sub-STUKLFR0077/sub-STUKLFR0077fastsurfer/fsaverage/surf/lh.sphere.reg
Done
Using surf2surf_nnfr()
Mapping Source Volume onto Source Subject Surface with Jacobian Correction
surf2surf_nnfr_jac: building source hash (res=16).
Surf2SurfJac: 1st Forward Loop (163842)
Surf2SurfJac: 2nd Forward Loop (163842)
surf2surf_nnfr: building target hash (res=16).
Surf2SurfJac: Reverse Loop (147802)
Reverse Loop had 20420 hits
INFO: nSrcLost = 0
surf2surf_nnfr_jac() done
nTrg121 = 145243, nTrgMulti = 18599, MnTrgMultiHits = 2.09791
nSrc121 = 116335, nSrcLost =     0, nSrcMulti = 31467, MnSrcMultiHits = 2.15867
Reading target space mask label lh.cortex.label
masking the input
Saving target data
Saving to /g100_work/EIRI_E_UNIPD/data/derivatives/UKLFR/stroke_UKLFR/anat/sub-STUKLFR0077/features/tmp.mris_preproc.42771/sub-STUKLFR0077.1.mgh